CDS

Accession Number TCMCG016C28587
gbkey CDS
Protein Id OMO50770.1
Location join(67808..67885,67977..68036,68304..68461,69009..69132,69223..69320,69412..69525,69853..69913,70288..70437,71225..71335,71422..71589,71686..71799,72147..72203,72660..73484)
Organism Corchorus capsularis
locus_tag CCACVL1_30273

Protein

Length 705aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01016037.1
Definition Mechanosensitive ion channel MscS [Corchorus capsularis]
Locus_tag CCACVL1_30273

EGGNOG-MAPPER Annotation

COG_category M
Description Mechanosensitive ion channel protein
KEGG_TC 1.A.23.4
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K22047        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGACACGTGTTGCTTCGATGCAATTGTCTCATGAACCAAAAATTCGCAATAGTCATGGATGCAGTAGCCAGCATTTCGGTGTGATGGAAAAAAGTCGAGTACATTTGGTTAATATCAATCTTTCCTCACGTGCTATGCGACAGGATGCTTGGAGTCTTCATCTTTTGAGCAGTGTTTGTATGCCGATAAGACCTGTATCCTCCAGGTCTAATGTCGTTCTCTGCCGATCTGTTTTAATTCCTACTGGTGGAAATGAGGTTCCTATTCTAAAATCTGCTAGTGTGGTTTTGGCAAGAACATTTGAAACTATAAACGGAAGCCCTATTATACCTCGCTTGATTCCAGCAGTTGGGATTATTGCTTTTGCTGCATGGGGTCTTGGGCCACTTATGCGGTTGGGCAGAGTTATCTTTTTCCATAGGGGTGATAGCAGTTGGAAGAAAAGTAGAACACATCACTTTATGAGCTACTATGTTCGACCTGTGCTGCTGTGGACTGGAGCAACACTTCTCTGCAGAGCGTTAGATCCAGTAGTTTTACCCTCAGAAGCCACCCATGCTGTTAAGCAACGACTTCTGAATTTTGTGCGATCATTATCAACAGTGCTAGCTTTCTCGTATTGTTTGTCAAGCTTAATTCAACAGGCTCAAAAATTCTTTATGGAGATGAATGAATCTAATGATGCAAGAACTATGGGCTTCGATTTTGCTGGAAAAGCTGTTTATACTGCAGTATGGGTGGCTGCTGTGTCATTGTTCATGGAGTTGCTTGGTTTTAAGGCTCAGAAGTGGCTAACAGCTGGAGGACTTGGGACAGTATTAATCACCCTCGCTGGTCGTGAGATATTCACAAACTTCCTTTCAAGTGTAATGATCCATGCAACGAGACCATTTGTTGTCAATGAATGGATTCAAACAAATATTGAAGGGTATGAAGTTTCAGGGACAGTTGAGCATGTTGGATGGTGGTCACCGACGATTATAAGAGGTGATGACCGTGAGGCAGTACATATTCCTAACCACAAGTTTACTGTTAACGTTGTGAGGAACCTTAGCCAGAAAACTCATTGGCGGATCAAGAATTACTTTGCCATTAGTCACTTGGATGTTAACAAAATTAATACTATAGTTGCTGACATGCGTAAGGTTTTAGCCAAAAATCCTCAAGTAGAGCAGCAAAGATTGCATAGAAGAGTATTCTTGGAAAGTATCAATCCAGAAAACCAGGCCCTTATGATTTTGGTATCTTGTTTTGTGAAAACCTCACGTATTGAAGAGTACCTTTGTGTTAAGGAAGCTATACTCTTGGATCTTCTTAGAGTGATTAGGCATCATCGAGCCAGACTTGCCACCCCGCTCCGCACAGTTCAGAAAATGTACAGCGAGGCTGAAGTAGAAGATATACCATTTGCTGACACCATTTTCAGACGTTCTGGAGCAGCTACCAATCGACCACTTCTCCTCATTGAACCCTCTTATAAAATCAATGGTGATGACAAGGTCAGATCTTCAACACATGCAAATGAAGAAAAAGATGTTGAGGAAGCAAGCTCAATATCTGACTCAAAGGCAAATACCAAGTCTGGATCAACATCGGTTGTTGACTCCAAAGGAGATAAGGTTATGGCATCATCAACCACTAACTCCAGTTCAAGTTTGAAAGCATCGTCATCAGAGGCCCAAAGTGGGAATCTCATGCCCGATGGATCAGTTGAAGTCAAATCAGAAGAGCAATCCAAAGAGAGCTGGGGAGAAGCTAGGAAGGCGATGAGTTCAGGAAGGGTTGGCACTGAGAAGTCTCCAGTTGCTAACCTACAATCTGCAAAGGAAGAATCTGAAATCCCATCGGCCTTTTCACAGGCAAGGCAGGATATTGACAGGTCTGTTGGGCTGCCGTCAGTAGCCAGACCTTCATTGGAAGAGAACATTGTTCTTGAAGTTGCTCTGGAGGGCTCTAAACTGACCCTTCCAATTGAGGAAGAAATAGCTGCATCCAGTTTGGCCGCAGAGTCAAAGGAATTGGGTGGTCAGCAAAGTGGAGGCGGGTCTCATCTGGTTGGCAGTGACAAGAAAGATGGTCAGATGCCATTAGTTCACGGTGGCACCCAAAGCAATTAG
Protein:  
MTRVASMQLSHEPKIRNSHGCSSQHFGVMEKSRVHLVNINLSSRAMRQDAWSLHLLSSVCMPIRPVSSRSNVVLCRSVLIPTGGNEVPILKSASVVLARTFETINGSPIIPRLIPAVGIIAFAAWGLGPLMRLGRVIFFHRGDSSWKKSRTHHFMSYYVRPVLLWTGATLLCRALDPVVLPSEATHAVKQRLLNFVRSLSTVLAFSYCLSSLIQQAQKFFMEMNESNDARTMGFDFAGKAVYTAVWVAAVSLFMELLGFKAQKWLTAGGLGTVLITLAGREIFTNFLSSVMIHATRPFVVNEWIQTNIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKNYFAISHLDVNKINTIVADMRKVLAKNPQVEQQRLHRRVFLESINPENQALMILVSCFVKTSRIEEYLCVKEAILLDLLRVIRHHRARLATPLRTVQKMYSEAEVEDIPFADTIFRRSGAATNRPLLLIEPSYKINGDDKVRSSTHANEEKDVEEASSISDSKANTKSGSTSVVDSKGDKVMASSTTNSSSSLKASSSEAQSGNLMPDGSVEVKSEEQSKESWGEARKAMSSGRVGTEKSPVANLQSAKEESEIPSAFSQARQDIDRSVGLPSVARPSLEENIVLEVALEGSKLTLPIEEEIAASSLAAESKELGGQQSGGGSHLVGSDKKDGQMPLVHGGTQSN